Coming home

The second part of my project involves DNA extraction from my soil samples. For that, I travel to Nanjing and work in the lab of Dr. Fang Wang in the Chinese Academy of Sciences, Soil Science Institute.  Nanjing is only about an hour from Shanghai, which makes my presence much less of a novelty, as …

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When the rain comes

My fieldwork in China started off rough. After the sparkle of the first week – being an honored guest, attending lavish dinners and getting private tours – wore off what remained was me, our research team of five and a project that had some serious American bias hiding within it. The soil analysis for my …

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What I actually do

So if you remember from previous blogs, my research project is attempting to find differences is in the soil-microbial community between corn, rice (grasses) and soy (a legume). Global soybean trade, specifically soybeans from Brazil and the USA, are being imported by China; these imports are cheaper than domestically produced soybeans, thus driving out China’s …

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Metabolic Rift

I spent most of the beautiful afternoon weather we had yesterday sitting within four walls at the Kellogg Center listening to Brett Clark talk about “the metabolic rift.” Like most academic outings and too many Thornapple Blogs, the conversation drifted into overly fine attempts at correction and counter-correction. But I think I’ll resist the temptation …

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The Story Behind “Tackling soil diversity with the assembly of large, complex metagenomes”

I’m pleased to announce the publication of “Tackling soil diversity with the assembly of large, complex metagenomes”, by Adina Howe, Janet Jansson, Stephanie Malfatti, Susannah Tringe, James Tiedje, and myself. The paper is openly available on the PNAS Web site here (open access). External links: Joint Genome Institute press release GenomeWeb article MSU press release …

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